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Citing CMDGA
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Assay category
4
DNA binding
Assay
4
ChIP-seq
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Target of assay
4
histone
4
histone modification
2
broad histone mark
2
narrow histone mark
2
transcription factor
1
control
Biosample type
4
in vitro differentiated cells
Life stage
2
embryonic
2
unknown
Available data
4
bam
4
bed narrowPeak
4
bigWig
4
fastq
2
bed bed3+
Platform
2
Illumina Genome Analyzer IIx
2
Illumina HiSeq 2500
Run type
4
single-ended
Read length (nt)
2
36
2
40
1
50
Library made from
4
DNA
Date released
2
December, 2017
2
February, 2018
Lab
4
AMP-T2D consortium
Replication type
2
isogenic
2
unreplicated
Audit category:
3
inconsistent control read length
month_released!
May, 2022
organ_slims!
adipose tissue
Showing 4 of 4 results
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Experiment
TSTSR275745
released
Audit warning
1
ChIP-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR440619
released
Audit warning
1
ChIP-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Target:
H3K27me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR782922
released
Audit warning
1
ChIP-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Target:
H3K4me1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR568152
released
ChIP-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP