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Citing CMDGA
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Assay category
6
DNA binding
Assay
6
ChIP-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
6
hg19
1
GRCh38
Organism
6
Homo sapiens
Target of assay
5
transcription factor
1
histone
1
histone modification
1
narrow histone mark
Biosample type
5
cell line
1
tissue
Organ
5
liver
1
pancreas
Life stage
5
child
1
unknown
Available data
6
bam
6
bed narrowPeak
6
bigWig
6
fastq
5
bigBed narrowPeak
1
bed bed3+
Platform
63
Illumina HiSeq 2000
13
Illumina HiSeq 2500
6
Illumina Genome Analyzer
3
Illumina Genome Analyzer IIx
Run type
6
single-ended
Read length (nt)
4
27
2
36
Library made from
6
DNA
Date released
5
November, 2017
1
August, 2017
Lab
6
AMP-T2D consortium
Replication type
5
isogenic
1
anisogenic
Audit category:
6
missing controlled_by
files.file_type!
tagAlign
organ_slims!
bone element
Showing 6 of 6 results
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Experiment
TSTSR186296
released
Audit not_compliant
1
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
MXI1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR595089
released
Audit not_compliant
1
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
SREBF1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR944721
released
Audit not_compliant
1
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
POLR2A
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR410413
released
Audit not_compliant
1
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
SREBF2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR848711
released
Audit not_compliant
1
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
SREBF1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR033518
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female (37 years) and female (41 year) and female (58 years) and male (36 years)
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP