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Schema
Citing CMDGA
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Assay category
3
DNA binding
Assay
3
ChIP-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Target of assay
3
histone
3
histone modification
2
broad histone mark
1
narrow histone mark
1
transcription factor
Biosample type
3
in vitro differentiated cells
Life stage
2
embryonic
1
unknown
Available data
3
bam
3
bed narrowPeak
3
bigWig
3
fastq
1
bed bed3+
Platform
2
Illumina Genome Analyzer IIx
1
Illumina HiSeq 2500
Run type
3
single-ended
Read length (nt)
2
40
1
36
1
50
Library made from
3
DNA
Date released
2
February, 2018
1
December, 2017
Lab
3
AMP-T2D consortium
Replication type
2
unreplicated
1
isogenic
Audit category:
3
inconsistent control read length
0
inconsistent assembly
files.file_type!
bed broadPeak
Showing 3 of 3 results
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Experiment
TSTSR275745
released
Audit warning
1
ChIP-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR440619
released
Audit warning
1
ChIP-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Target:
H3K27me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR782922
released
Audit warning
1
ChIP-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Target:
H3K4me1
Lab:
AMP-T2D consortium
Project:
AMP