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Assay category
3
DNA binding
Assay
146
total RNA-seq
141
single cell RNA-seq
60
ATAC-seq
60
snATAC-seq
47
WGBS
4
Hi-C
3
CRISPR genome editing followed by DNA sequencing
3
ChIP-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Project
AMP
3
T1D
RFA
3
T1D
Experiment status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Biosample type
2
tissue
1
cell line
Organ
3
pancreas
1
epithelium
Life stage
2
adult
1
unknown
Available data
3
bam
3
bed narrowPeak
3
bigWig
Library made from
3
DNA
Date released
May, 2021
3
March, 2020
Lab
3
AMP-T2D consortium
Replication type
2
anisogenic
1
isogenic
Audit category:
1
inconsistent ontology term
award.project!
AMP
month_released!
January, 2021
May, 2021
organ_slims!
artery
Showing 3 of 3 results
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Experiment
DSR269GKW
released
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (53 years) and female adult (62 years) and male adult (34 years) and male adult (52 years)
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
T1D
Experiment
DSR886XRY
released
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (53 years) and female adult (62 years) and male adult (34 years) and male adult (52 years)
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
T1D
Experiment
DSR780WPW
released
Audit error
1
ChIP-seq
of EndoC_BH1
Homo sapiens
EndoC_BH1
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
T1D