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Citing CMDGA
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Assay category
5
DNA binding
Assay
5
ChIP-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Target of assay
560
histone
560
histone modification
287
narrow histone mark
273
broad histone mark
142
control
94
transcription factor
31
RNA binding protein
5
chromatin remodeller
3
other context
3
other post-translational modification
Biosample type
4
cell line
1
tissue
Organ
4
blood
4
bodily fluid
1
liver
Life stage
21
child
5
adult
3
unknown
1
embryonic
Available data
5
bam
5
bed narrowPeak
5
bigBed narrowPeak
5
bigWig
5
fastq
Platform
4
Illumina HiSeq 2500
1
Illumina HiSeq 2000
Run type
5
single-ended
Read length (nt)
4
76
2
75
1
50
Library made from
5
DNA
Date released
January, 2019
2
December, 2018
2
November, 2018
1
December, 2017
Lab
5
AMP-T2D consortium
Replication type
3
isogenic
2
unreplicated
Audit category:
2
inconsistent control
month_released!
January, 2019
Showing 5 of 5 results
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Experiment
TSTSR954QFA
released
ChIP-seq
of GM12878
Homo sapiens
GM12878
Target:
ASH2L
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR362FXX
released
Audit error
1
ChIP-seq
of GM12878
Homo sapiens
GM12878
Target:
HDAC2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR302PGZ
released
ChIP-seq
of GM12878
Homo sapiens
GM12878
Target:
HDAC6
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR149WII
released
ChIP-seq
of GM12878
Homo sapiens
GM12878
Target:
SUZ12
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR039304
released
Audit error
1
ChIP-seq
of liver
Homo sapiens
liver male adult (32 years)
Target:
REST
Lab:
AMP-T2D consortium
Project:
AMP