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Schema
Citing CMDGA
Clear Filters
Assay category
2
DNA binding
Assay
2
ChIP-seq
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Target of assay
histone
6
histone modification
4
narrow histone mark
2
broad histone mark
1
RNA binding protein
1
control
1
transcription factor
Biosample type
2
cell line
Organ
2
liver
Life stage
2
child
Available data
2
bam
2
bigWig
2
fastq
1
bed broadPeak
1
bed narrowPeak
1
bigBed broadPeak
1
bigBed narrowPeak
1
tagAlign
Platform
204
Illumina HiSeq 2000
54
Illumina Genome Analyzer IIx
Illumina Genome Analyzer
37
Illumina HiSeq 2500
11
Illumina HiSeq 4000
2
Illumina Genome Analyzer II
2
Illumina Genome Analyzer IIe
Run type
2
single-ended
Read length (nt)
2
36
Library made from
2
DNA
Date released
2
November, 2017
Lab
2
AMP-T2D consortium
Replication type
2
isogenic
Audit category:
1
inconsistent control read length
files.platform.term_name!
Illumina Genome Analyzer
month_released!
June, 2018
target.investigated_as!
histone
Showing 2 of 2 results
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Experiment
TSTSR310667
released
Audit warning
1
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR097481
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP