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Citing CMDGA
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Assay category
6
DNA binding
Assay
89
total RNA-seq
6
ChIP-seq
1
ATAC-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
6
GRCh38
6
hg19
Organism
6
Homo sapiens
Target of assay
5
transcription factor
1
histone
1
histone modification
1
narrow histone mark
Biosample type
6
tissue
Organ
6
pancreas
Life stage
6
unknown
Available data
6
bam
6
bed bed3+
6
bigWig
6
fastq
Platform
10
Illumina Genome Analyzer
7
Illumina Genome Analyzer II
6
Illumina HiSeq 2000
3
Illumina Genome Analyzer IIx
2
Illumina HiSeq 2500
Run type
6
single-ended
Read length (nt)
5
49
3
51
Library made from
6
DNA
Date released
6
August, 2017
Lab
6
AMP-T2D consortium
Replication type
6
anisogenic
Audit category:
6
missing controlled_by
lab.title!
Anna Gloyn, Oxford
Karen Mohlke, UNC
Showing 6 of 6 results
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Experiment
TSTSR903829
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female (38 years) and male (38 years)
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR570121
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female (46 years) and male (64 years)
Target:
NKX6.1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR797006
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female (58 years) and female (63 years)
Target:
NKX2.2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR213602
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans NONE and female (63 years)
Target:
MAFB
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR003436
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female (38 years) and male (38 years)
Target:
PDX1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR644140
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male (34 years) and male (38 years)
Target:
FOXA2
Lab:
AMP-T2D consortium
Project:
AMP