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Citing CMDGA
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Assay category
6
DNA binding
Assay
6
ChIP-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
6
Homo sapiens
Target of assay
10
histone
10
histone modification
6
narrow histone mark
5
control
4
broad histone mark
3
transcription factor
Biosample type
6
in vitro differentiated cells
Organ
6
embryo
Life stage
3
embryonic
3
unknown
Available data
6
bam
6
fastq
5
bed narrowPeak
5
bigWig
1
bed bed3+
Platform
3
Illumina Genome Analyzer IIx
3
Illumina HiSeq 2500
Run type
6
single-ended
Read length (nt)
6
36
Library made from
6
DNA
Date released
3
December, 2017
3
February, 2018
Lab
6
AMP-T2D consortium
Replication type
5
unreplicated
1
isogenic
Audit category:
1
missing controlled_by
files.file_type!
bed broadPeak
lab.title!
Katalin Susztak, Upenn
Showing 6 of 6 results
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Experiment
TSTSR299561
released
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR875507
released
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR547493
released
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR522624
released
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR020690
released
Audit not_compliant
1
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR290464
released
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP