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Citing CMDGA
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Assay category
8
DNA binding
Assay
10
total RNA-seq
8
ChIP-seq
6
DNase-seq
4
single cell RNA-seq
2
ATAC-seq
2
pCHi-C
1
Hi-C
1
RRBS
1
small RNA-seq
Project
8
AMP
RFA
8
AMP
Experiment status
8
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
8
Homo sapiens
Target of assay
8
histone
8
histone modification
4
broad histone mark
narrow histone mark
3
control
1
RNA binding protein
1
transcription factor
Biosample type
61
tissue
51
in vitro differentiated cells
8
primary cell
Organ
57
epithelium
39
pancreas
15
vasculature
13
blood vessel
11
vein
10
kidney
8
connective tissue
6
brain
6
musculature of body
3
heart
2
eye
2
liver
Life stage
7
adult
1
unknown
Available data
8
bam
5
bed narrowPeak
5
bigBed narrowPeak
5
bigWig
Library made from
8
DNA
Date released
8
June, 2019
Lab
8
AMP-T2D consortium
Replication type
5
anisogenic
3
unreplicated
Audit category:
7
inconsistent ontology term
month_released!
February, 2023
target.investigated_as!
narrow histone mark
Showing 8 of 8 results
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Experiment
DSR492IXR
released
Audit error
1
ChIP-seq
of mesenchymal stem cell
Homo sapiens
mesenchymal stem cell female adult (41 year) and female adult (59 years)
Target:
H3K9me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR980ZJI
released
Audit error
1
ChIP-seq
of mesenchymal stem cell
Homo sapiens
mesenchymal stem cell female adult (41 year) and female adult (59 years)
Target:
H3K4me1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR198JCC
released
Audit error
1
ChIP-seq
of mesenchymal stem cell
Homo sapiens
mesenchymal stem cell female adult and female adult (59 years)
Target:
H3K36me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR157TJH
released
Audit error
1
ChIP-seq
of mesenchymal stem cell
Homo sapiens
mesenchymal stem cell female adult and female adult (59 years)
Target:
H3K27me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR037AMD
released
Audit error
1
ChIP-seq
of mesenchymal stem cell
Homo sapiens
mesenchymal stem cell female adult and female adult (41 year) and female adult (59 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR563PGZ
released
Audit error
1
ChIP-seq
of cardiac fibroblast
Homo sapiens
cardiac fibroblast female adult
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR021YAN
released
Audit error
1
ChIP-seq
of cardiac fibroblast
Homo sapiens
cardiac fibroblast female adult
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR553USJ
released
ChIP-seq
of cardiac fibroblast
Homo sapiens
cardiac fibroblast
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP