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Citing CMDGA
Clear Filters
Assay category
5
DNA binding
Assay
5
ChIP-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Target of assay
5
histone
5
histone modification
3
narrow histone mark
2
broad histone mark
Biosample type
4
primary cell
1
tissue
Organ
5
pancreas
Life stage
5
adult
Available data
5
bam
5
bigWig
5
fastq
2
bed narrowPeak
1
bigBed narrowPeak
Platform
4
Illumina HiSeq 2000
1
Illumina HiSeq 2500
Run type
5
single-ended
Read length (nt)
188
36
171
76
107
100
90
50
52
51
36
40
11
25
11
27
10
101
7
35
7
49
6
33
4
44
4
61
4
75
3
32
3
200
2
70
2
74
1
30
1
37
1
38
1
67
1
72
Library made from
5
DNA
Date released
3
August, 2017
1
October, 2018
1
September, 2018
Lab
5
AMP-T2D consortium
Replication type
4
unreplicated
1
isogenic
Audit category:
4
missing controlled_by
Audit category:
1
inconsistent control read length
month_released!
October, 2017
target.investigated_as!
control
Showing 5 of 5 results
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Experiment
TSTSR473FQY
released
Audit warning
1
ChIP-seq
of body of pancreas
Homo sapiens
body of pancreas male adult (37 years)
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR248LEQ
released
Audit not_compliant
1
ChIP-seq
of pancreatic endocrine cell
Homo sapiens
pancreatic endocrine cell female adult (48 years)
Target:
H3K4me1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR690557
released
Audit not_compliant
1
ChIP-seq
of pancreatic endocrine cell
Homo sapiens
pancreatic endocrine cell adult
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR179007
released
Audit not_compliant
1
ChIP-seq
of pancreatic endocrine cell
Homo sapiens
pancreatic endocrine cell adult
Target:
H3K27me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR846115
released
Audit not_compliant
1
ChIP-seq
of pancreatic endocrine cell
Homo sapiens
pancreatic endocrine cell adult
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP