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Assay category
1
DNA accessibility
Assay
771
ChIP-seq
237
total RNA-seq
134
single cell RNA-seq
59
ATAC-seq
27
snATAC-seq
17
WGBS
5
GRO-seq
4
RRBS
2
FAIRE-seq
1
DNase-seq
1
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1
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Project
1
AMP
RFA
1
AMP
Experiment status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
tissue
Organ
1
pancreas
Life stage
1
unknown
Available data
209
bam
209
bed narrowPeak
209
bigBed narrowPeak
209
bigWig
bed broadPeak
206
bigBed broadPeak
204
bed bed3+
12
fastq
Platform
1
Illumina Genome Analyzer
Run type
1
single-ended
Read length (nt)
1
20
Library made from
1
DNA
Date released
1
August, 2017
Lab
1
AMP-T2D consortium
Replication type
1
anisogenic
assay_title!
CRISPR genome editing followed by sgRNA sequencing
files.file_type!
bed broadPeak
lab.title!
Mark McCarthy, Oxford
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Experiment
TSTSR171380
released
DNase-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans
Lab:
AMP-T2D consortium
Project:
AMP