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Assay category
1
DNA accessibility
Assay
111
ChIP-seq
52
total RNA-seq
37
ATAC-seq
5
pCHi-C
4
GRO-seq
4
Hi-C
2
Capture-C
2
single cell RNA-seq
1
DNase-seq
Project
1
AMP
RFA
1
AMP
Experiment status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
178
tissue
31
primary cell
2
cell line
1
in vitro differentiated cells
Organ
1
connective tissue
Life stage
1
unknown
Available data
1
bam
1
bed broadPeak
1
bed narrowPeak
1
bigBed broadPeak
1
bigBed narrowPeak
1
bigWig
1
fastq
Platform
1
Illumina HiSeq 2000
Run type
1
paired-ended
Read length (nt)
1
36
Library made from
1
DNA
Date released
1
August, 2017
Lab
1
AMP-T2D consortium
Replication type
1
isogenic
assay_title!
snDrop-seq
month_released!
May, 2021
target.investigated_as!
narrow histone mark
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Experiment
TSTSR999372
released
DNase-seq
of adipocyte
Homo sapiens
adipocyte
Lab:
AMP-T2D consortium
Project:
AMP