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Citing CMDGA
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Assay category
4
DNA accessibility
Assay
18
ATAC-seq
4
DNase-seq
2
single cell RNA-seq
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
Organ
1
adipose tissue
1
brain
1
connective tissue
1
pancreas
1
spleen
Life stage
3
adult
1
embryonic
Available data
4
bam
4
bed bed3+
4
bed broadPeak
4
bed narrowPeak
4
bigBed broadPeak
4
bigBed narrowPeak
4
bigWig
4
fastq
Platform
6
Illumina HiSeq 4000
4
Illumina NextSeq 500
3
Illumina HiSeq 2000
1
Illumina Genome Analyzer II
1
Illumina Genome Analyzer IIx
1
Illumina HiSeq 2500
Run type
4
paired-ended
Read length (nt)
4
36
Library made from
4
DNA
Date released
4
November, 2018
Lab
4
AMP-T2D consortium
Replication type
4
unreplicated
assay_title!
snDrop-seq
replication_type!
anisogenic
Showing 4 of 4 results
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Experiment
TSTSR436ZZC
released
DNase-seq
of spleen
Homo sapiens
spleen male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR521KIV
released
DNase-seq
of omental fat pad
Homo sapiens
omental fat pad female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR195PGP
released
DNase-seq
of body of pancreas
Homo sapiens
body of pancreas female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR479BAW
released
DNase-seq
of brain
Homo sapiens
brain embryo (80 days)
Lab:
AMP-T2D consortium
Project:
AMP