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Assay category
1
DNA accessibility
Assay
128
ChIP-seq
9
total RNA-seq
4
RRBS
1
DNase-seq
Project
1
AMP
RFA
1
AMP
Experiment status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Life stage
1
unknown
Available data
1
bam
1
bed broadPeak
1
bed narrowPeak
1
bigBed broadPeak
1
bigBed narrowPeak
1
bigWig
1
fastq
Platform
Illumina HiSeq 4000
4
Illumina HiSeq 2000
4
Illumina NextSeq 500
2
Illumina HiSeq 2500
1
Illumina Genome Analyzer
1
Illumina Genome Analyzer II
1
Illumina Genome Analyzer IIx
Run type
1
paired-ended
1
single-ended
Read length (nt)
1
36
1
101
Library made from
1
DNA
Date released
1
August, 2017
Lab
1
AMP-T2D consortium
Replication type
1
isogenic
assay_title!
whole genome sequencing assay
assay_title!!
whole genome sequencing assay
files.platform.term_name!
Illumina HiSeq 4000
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Experiment
TSTSR251267
released
DNase-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast
Lab:
AMP-T2D consortium
Project:
AMP