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Assay category
7
DNA accessibility
Assay
83
total RNA-seq
80
single cell RNA-seq
61
ChIP-seq
58
ATAC-seq
5
DNase-seq
5
Hi-C
5
pCHi-C
2
small RNA-seq
2
snATAC-seq
1
DNAme array
0
RRBS
Project
5
AMP
2
T1D
RFA
5
AMP
2
T1D
Experiment status
7
released
Genome assembly (visualization)
3
GRCh38
Organism
7
Homo sapiens
Biosample type
25
tissue
7
primary cell
Organ
4
epithelium
4
kidney
2
blood
2
bodily fluid
1
connective tissue
1
heart
Life stage
4
adult
2
unknown
1
embryonic
Available data
3
bam
3
bed bed3+
3
bed broadPeak
3
bed narrowPeak
3
bigBed broadPeak
3
bigBed narrowPeak
3
bigWig
Library made from
7
DNA
Date released
3
June, 2019
2
January, 2021
2
October, 2019
Lab
5
AMP-T2D consortium
2
Kyle Gaulton, UCSD
Replication type
62
unreplicated
28
isogenic
7
anisogenic
Showing 7 of 7 results
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Experiment
DSR294OVU
released
snATAC-seq
of peripheral blood mononuclear cell
Homo sapiens
peripheral blood mononuclear cell male
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR247GCT
released
snATAC-seq
of peripheral blood mononuclear cell
Homo sapiens
peripheral blood mononuclear cell male
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR920RBU
released
DNase-seq
of kidney glomerular epithelial cell
Homo sapiens
kidney glomerular epithelial cell male adult (46 years) and male adult (62 years) and male adult (63 years) and male adult (65 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR290FAD
released
DNase-seq
of kidney tubule cell
Homo sapiens
kidney tubule cell female adult (80 years) and male adult (62 years) and male adult (63 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR703FQO
released
DNase-seq
of kidney tubule cell
Homo sapiens
kidney tubule cell female adult (80 years) and male adult (62 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR939IHO
released
DNase-seq
of kidney glomerular epithelial cell
Homo sapiens
kidney glomerular epithelial cell male adult (43 years) and male adult (62 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR110FEN
released
DNase-seq
of cardiac fibroblast
Homo sapiens
cardiac fibroblast female embryo (94 days) and female embryo (98 days)
Lab:
AMP-T2D consortium
Project:
AMP