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Schema
Citing CMDGA
Clear Filters
Assay category
4
DNA methylation
3
DNA accessibility
Assay
374
ChIP-seq
184
total RNA-seq
22
ATAC-seq
4
WGBS
3
DNase-seq
3
Hi-C
3
pCHi-C
3
small RNA-seq
2
STARR-seq
1
RRBS
1
single cell RNA-seq
1
whole genome sequencing assay
Project
7
AMP
RFA
7
AMP
Experiment status
7
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
7
Homo sapiens
Biosample type
5
tissue
2
primary cell
Organ
81
kidney
38
heart
37
limb
34
musculature of body
30
brain
19
epithelium
18
ureter
13
connective tissue
13
vasculature
11
blood vessel
8
pancreas
7
adipose tissue
7
liver
4
artery
4
eye
2
nerve
2
vein
Life stage
5
adult
1
child
1
unknown
Available data
2
bam
2
bed bed3+
2
bed broadPeak
2
bed narrowPeak
2
bigBed broadPeak
2
bigBed narrowPeak
2
bigWig
1
fastq
Platform
1
Illumina HiSeq 2500
Run type
paired-ended
1
single-ended
Read length (nt)
1
100
Library made from
7
DNA
Date released
4
August, 2017
2
June, 2019
1
July, 2019
Lab
7
AMP-T2D consortium
Replication type
6
unreplicated
1
isogenic
files.read_length!
36
files.run_type!
paired-ended
Showing 7 of 7 results
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Experiment
DSR696NUE
released
WGBS
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR059MSK
released
DNase-seq
of hepatocyte
Homo sapiens
hepatocyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR762OSH
released
DNase-seq
of hepatic stellate cell
Homo sapiens
hepatic stellate cell female adult (59 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR621783
released
WGBS
of liver
Homo sapiens
liver male child (3 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR259530
released
WGBS
of liver
Homo sapiens
liver female adult (25 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR873184
released
WGBS
of liver
Homo sapiens
liver male adult (31 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR715510
released
DNase-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP