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Citing CMDGA
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Assay category
2
DNA accessibility
Assay
167
total RNA-seq
145
ChIP-seq
20
ATAC-seq
3
WGBS
2
DNase-seq
1
Hi-C
1
RRBS
1
pCHi-C
1
single cell RNA-seq
1
small RNA-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Organ
3
liver
Life stage
2
embryonic
1
unknown
Available data
2
bam
2
bed bed3+
2
bed broadPeak
2
bed narrowPeak
2
bigBed broadPeak
2
bigBed narrowPeak
2
bigWig
2
fastq
1
tsv
Platform
1
Illumina HiSeq 2000
1
Illumina HiSeq 2500
1
Illumina HiSeq 4000
Run type
2
paired-ended
Read length (nt)
2
36
Library made from
3
DNA
Date released
2
November, 2018
1
March, 2020
Lab
3
AMP-T2D consortium
Replication type
2
anisogenic
1
unreplicated
month_released!
September, 2020
organ_slims!
intestine
Showing 3 of 3 results
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Experiment
DSR534MRK
released
pCHi-C
of liver
Homo sapiens
liver
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR004CBL
released
DNase-seq
of liver
Homo sapiens
liver embryo (59 days) and embryo (80 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR869ANN
released
DNase-seq
of liver
Homo sapiens
liver female embryo (113 days)
Lab:
AMP-T2D consortium
Project:
AMP