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Citing CMDGA
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Assay category
2
DNA accessibility
Assay
122
total RNA-seq
71
ChIP-seq
18
ATAC-seq
2
DNase-seq
1
Hi-C
0
snATAC-seq
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
1
in vitro differentiated cells
1
tissue
Organ
1
connective tissue
1
liver
Life stage
1
embryonic
1
unknown
Available data
2
bam
2
bed broadPeak
2
bed narrowPeak
2
bigBed broadPeak
2
bigBed narrowPeak
2
bigWig
2
fastq
1
bed bed3+
Platform
37
Illumina NovaSeq 6000
11
HiSeq HighOutput V4
6
Illumina HiSeq 4000
4
Illumina NextSeq 500
2
Illumina HiSeq 2000
2
Illumina HiSeq 2500
Run type
3
paired-ended
single-ended
Read length (nt)
2
36
Library made from
2
DNA
Date released
1
August, 2017
1
November, 2018
Lab
2
AMP-T2D consortium
Replication type
1
anisogenic
1
isogenic
files.run_type!
single-ended
Showing 2 of 2 results
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Experiment
TSTSR004CBL
released
DNase-seq
of liver
Homo sapiens
liver embryo (59 days) and embryo (80 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR999372
released
DNase-seq
of adipocyte
Homo sapiens
adipocyte
Lab:
AMP-T2D consortium
Project:
AMP