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Assay category
4
DNA accessibility
2
Transcription
Assay
single cell RNA-seq
18
ATAC-seq
4
DNase-seq
2
total RNA-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
6
GRCh38
6
hg19
Organism
6
Homo sapiens
Biosample type
6
tissue
Organ
3
pancreas
1
adipose tissue
1
brain
1
connective tissue
1
spleen
Life stage
5
adult
1
embryonic
Available data
6
bam
6
bigWig
6
fastq
4
bed bed3+
4
bed broadPeak
4
bed narrowPeak
4
bigBed broadPeak
4
bigBed narrowPeak
2
tsv
Platform
140
Illumina HiSeq 2000
76
Illumina NovaSeq 6000
28
Illumina HiSeq 4000
10
Illumina Genome Analyzer IIx
6
Illumina NextSeq 500
2
Illumina HiSeq 2500
1
Illumina Genome Analyzer
1
Illumina Genome Analyzer II
Run type
6
paired-ended
Read length (nt)
4
36
2
75
Library made from
4
DNA
2
RNA
Date released
4
November, 2018
2
July, 2018
Lab
6
AMP-T2D consortium
Replication type
4
unreplicated
2
anisogenic
assay_title!
single cell RNA-seq
organ_slims!
nerve
Showing 6 of 6 results
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Experiment
TSTSR436ZZC
released
DNase-seq
of spleen
Homo sapiens
spleen male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR521KIV
released
DNase-seq
of omental fat pad
Homo sapiens
omental fat pad female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR195PGP
released
DNase-seq
of body of pancreas
Homo sapiens
body of pancreas female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR479BAW
released
DNase-seq
of brain
Homo sapiens
brain embryo (80 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR028148
released
total RNA-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (37 years) and female adult (55 years) and male adult (52 years) and male adult (57 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR752483
released
total RNA-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (48 years) and male adult (22 years) and male adult (23 years)
Lab:
AMP-T2D consortium
Project:
AMP