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Assay category
1
DNA accessibility
Assay
1392
total RNA-seq
477
ChIP-seq
369
single cell RNA-seq
226
ATAC-seq
87
RNA microarray
75
WGBS
66
snATAC-seq
32
pCHi-C
29
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
STARR-seq
4
Capture-C
4
GRO-seq
3
snDrop-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
DNase-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
1
AMP
RFA
1
AMP
Experiment status
1
released
Organism
1
Homo sapiens
Biosample type
1
tissue
Organ
1
liver
Life stage
1
adult
Available data
201
bam
bed narrowPeak
201
bigBed narrowPeak
201
bigWig
199
bed broadPeak
199
bigBed broadPeak
197
bed bed3+
12
fastq
Library made from
1
DNA
Date released
October, 2019
1
August, 2017
Lab
1
AMP-T2D consortium
Replication type
1
unreplicated
award.project!
T1D
biosample_type!
stem cell
files.file_type!
bed narrowPeak
month_released!
October, 2019
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Experiment
TSTSR715510
released
DNase-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP