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Citing CMDGA
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Assay category
4
DNA accessibility
Assay
548
ChIP-seq
180
total RNA-seq
22
ATAC-seq
4
DNase-seq
4
WGBS
3
Hi-C
3
pCHi-C
2
STARR-seq
1
RRBS
1
single cell RNA-seq
1
whole genome sequencing assay
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
primary cell
Organ
69
kidney
36
limb
32
musculature of body
27
brain
27
heart
18
ureter
8
pancreas
5
blood vessel
5
vasculature
4
artery
4
liver
3
connective tissue
3
eye
2
adipose tissue
2
nerve
1
epithelium
1
spleen
Life stage
2
adult
2
embryonic
Available data
3
bam
3
bed bed3+
3
bed broadPeak
3
bed narrowPeak
3
bigBed broadPeak
3
bigBed narrowPeak
3
bigWig
3
fastq
Platform
2
Illumina HiSeq 4000
1
Illumina HiSeq 2000
1
Illumina HiSeq 2500
Run type
3
paired-ended
Read length (nt)
3
36
Library made from
4
DNA
Date released
3
November, 2018
1
August, 2017
Lab
4
AMP-T2D consortium
Replication type
3
unreplicated
1
anisogenic
biosample_type!
primary cell
month_released!
July, 2019
Showing 4 of 4 results
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Experiment
TSTSR678CGC
released
DNase-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR004CBL
released
DNase-seq
of liver
Homo sapiens
liver embryo (59 days) and embryo (80 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR869ANN
released
DNase-seq
of liver
Homo sapiens
liver female embryo (113 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR715510
released
DNase-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP