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Citing CMDGA
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Assay category
2
DNA accessibility
Assay
478
ChIP-seq
61
total RNA-seq
20
ATAC-seq
6
MeRIP-seq
6
pCHi-C
5
STARR-seq
4
Hi-C
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
DNase-seq
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
MPRA
1
WGBS
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
151
tissue
28
primary cell
2
cell line
1
in vitro differentiated cells
Organ
1
epithelium
1
kidney
1
pancreas
Life stage
1
adult
1
child
Available data
2
bam
2
bed narrowPeak
2
bigBed narrowPeak
2
bigWig
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Library made from
2
DNA
Date released
2
October, 2019
Lab
2
AMP-T2D consortium
Replication type
2
isogenic
files.file_type!
bed bed3
organ_slims!
heart
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Experiment
DSR718ICF
released
DNase-seq
of Panc1
Homo sapiens
Panc1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR366LGT
released
DNase-seq
of glomerular visceral epithelial cell
Homo sapiens
glomerular visceral epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP