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Assay category
1
DNA accessibility
Assay
111
ChIP-seq
109
total RNA-seq
28
ATAC-seq
6
MeRIP-seq
4
Hi-C
4
pCHi-C
3
CRISPR genome editing followed by DNA sequencing
3
STARR-seq
2
Capture-C
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
DNase-seq
1
MPRA
1
WGBS
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
1
AMP
RFA
1
AMP
Experiment status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
110
tissue
19
primary cell
1
cell line
1
in vitro differentiated cells
Organ
1
epithelium
kidney
1
pancreas
Life stage
1
adult
Available data
1
bam
1
bed bed3+
1
bed broadPeak
1
bed narrowPeak
1
bigBed broadPeak
1
bigBed narrowPeak
1
bigWig
Library made from
1
DNA
Date released
1
October, 2019
Lab
1
AMP-T2D consortium
Replication type
1
isogenic
organ_slims!
blood
kidney
target.investigated_as!
transcription factor
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Experiment
DSR718ICF
released
DNase-seq
of Panc1
Homo sapiens
Panc1
Lab:
AMP-T2D consortium
Project:
AMP