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Assay category
1
DNA accessibility
Assay
397
total RNA-seq
218
ChIP-seq
152
ATAC-seq
80
single cell RNA-seq
51
WGBS
11
snATAC-seq
10
MeRIP-seq
9
Hi-C
2
Capture-C
2
FAIRE-seq
2
RRBS
2
small RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
DNase-seq
1
pCHi-C
Project
1
AMP
RFA
1
AMP
Experiment status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
tissue
Organ
3
epithelium
3
kidney
1
liver
1
pancreas
Life stage
1
unknown
Available data
8
bam
8
bed narrowPeak
8
bigBed narrowPeak
8
bigWig
7
bed bed3+
7
bed broadPeak
bigBed broadPeak
3
fastq
Platform
1
Illumina Genome Analyzer
Run type
1
single-ended
Read length (nt)
1
20
Library made from
1
DNA
Date released
1
August, 2017
Lab
1
AMP-T2D consortium
Replication type
1
anisogenic
files.file_type!
bigBed broadPeak
csv
lab.title!
Struan F.A. Grant, CHOP
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Experiment
TSTSR171380
released
DNase-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans
Lab:
AMP-T2D consortium
Project:
AMP