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Citing CMDGA
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Assay category
3
DNA accessibility
Assay
729
ChIP-seq
235
total RNA-seq
133
single cell RNA-seq
61
ATAC-seq
27
snATAC-seq
10
WGBS
5
GRO-seq
4
RRBS
3
DNase-seq
1
FAIRE-seq
1
Hi-C
1
pCHi-C
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
1
in vitro differentiated cells
1
primary cell
1
tissue
Organ
1
connective tissue
1
pancreas
Life stage
3
unknown
Available data
200
bam
200
bed narrowPeak
200
bigBed narrowPeak
200
bigWig
197
bed broadPeak
197
bigBed broadPeak
195
bed bed3+
3
fastq
Platform
2
Illumina HiSeq 2000
1
Illumina Genome Analyzer
1
Illumina Genome Analyzer II
1
Illumina Genome Analyzer IIx
Run type
2
paired-ended
2
single-ended
Read length (nt)
2
36
1
20
1
101
Library made from
3
DNA
Date released
November, 2018
3
August, 2017
Lab
3
AMP-T2D consortium
Replication type
2
isogenic
1
anisogenic
month_released!
November, 2018
October, 2018
Showing 3 of 3 results
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Experiment
TSTSR999372
released
DNase-seq
of adipocyte
Homo sapiens
adipocyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR251267
released
DNase-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR171380
released
DNase-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans
Lab:
AMP-T2D consortium
Project:
AMP