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Assay
391
ChIP-seq
263
ATAC-seq
257
single cell RNA-seq
201
total RNA-seq
87
RNA microarray
72
snATAC-seq
51
WGBS
15
Hi-C
8
pCHi-C
2
Capture-C
2
HiChIP
2
RRBS
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNase-seq
1
MPRA
1
STARR-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
1
snDrop-seq
1
whole genome sequencing assay
0
FAIRE-seq
Project
2
T1D
1
AMP
RFA
2
T1D
1
AMP
Experiment status
3
released
Organism
3
Homo sapiens
Biosample type
2
cell line
1
tissue
Organ
1
kidney
Life stage
2
unknown
1
adult
Available data
1
bam
1
bed narrowPeak
1
bigBed narrowPeak
bigWig
1
fastq
1
tsv
Library made from
2
DNA
1
RNA
Date released
2
February, 2023
1
February, 2021
Lab
2
Kyle Gaulton, UCSD
1
AMP-T2D consortium
Replication type
3
unreplicated
2
anisogenic
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bigWig
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Experiment
DSR498QQL
released
HiChIP
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR895OVT
released
HiChIP
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR718NCQ
released
snDrop-seq
of kidney (Cortex-Medulla)
Homo sapiens
kidney male adult
Lab:
AMP-T2D consortium
Project:
AMP