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Citing CMDGA
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Assay category
7
DNA methylation
Assay
65
ChIP-seq
37
total RNA-seq
28
single cell RNA-seq
23
ATAC-seq
7
WGBS
0
FAIRE-seq
Project
6
HPAP
1
AMP
RFA
6
HPAP
1
AMP
Experiment status
7
released
Genome assembly (visualization)
1
GRCh38
Organism
7
Homo sapiens
Biosample type
6
primary cell
1
tissue
Organ
7
pancreas
6
epithelium
adipose tissue
3
connective tissue
liver
Life stage
5
adult
2
child
Available data
7
fastq
6
tsv
1
bam
1
bed bedMethyl
1
bigBed bedMethyl
1
bigWig
Platform
6
Illumina NovaSeq 6000
1
Illumina HiSeq 2500
Run type
6
paired-ended
1
single-ended
Read length (nt)
42
101
7
100
4
151
1
35
1
50
Library made from
7
DNA
Date released
6
February, 2021
1
November, 2018
Lab
6
Klaus Kaestner, Upenn
1
AMP-T2D consortium
Replication type
6
isogenic
1
unreplicated
organ_slims!
adipose tissue
liver
Showing 7 of 7 results
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Experiment
DSR163MXE
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male child (3 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR992DXL
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell female adult (24 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR248ORP
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male adult (46 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR791IRT
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell female child (14 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR622ITI
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell female adult (24 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR892CSM
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male adult (29 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
TSTSR575YHF
released
WGBS
of pancreas
Homo sapiens
pancreas female adult (30 years)
Lab:
AMP-T2D consortium
Project:
AMP