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Assay category
2
DNA accessibility
Assay
1460
total RNA-seq
1081
ChIP-seq
437
ATAC-seq
362
single cell RNA-seq
156
DNase-seq
87
RNA microarray
77
snATAC-seq
61
WGBS
34
pCHi-C
24
Hi-C
14
small RNA-seq
5
GRO-seq
4
Capture-C
4
MeRIP-seq
3
snDrop-seq
2
FAIRE-seq
2
HiChIP
2
RRBS
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
STARR-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Organ
brain
1
kidney
1
pancreas
Life stage
1
adult
1
unknown
Available data
2
bam
2
bed narrowPeak
2
bigBed narrowPeak
2
bigWig
1
fastq
Platform
1
Illumina Genome Analyzer I
Run type
1
single-ended
Read length (nt)
1
35
Library made from
2
DNA
Date released
1
August, 2017
1
July, 2019
November, 2018
Lab
2
AMP-T2D consortium
Replication type
1
anisogenic
isogenic
1
unreplicated
files.file_type!
vcf
month_released!
November, 2018
organ_slims!
brain
replication_type!
isogenic
Showing 2 of 2 results
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Experiment
DSR821PLA
released
FAIRE-seq
of kidney
Homo sapiens
kidney female adult (30 years) and male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR121227
released
FAIRE-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male (53 years)
Lab:
AMP-T2D consortium
Project:
AMP