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Citing CMDGA
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Assay category
3
DNA accessibility
Assay
451
total RNA-seq
236
ChIP-seq
224
ATAC-seq
144
single cell RNA-seq
85
DNase-seq
51
WGBS
17
snATAC-seq
10
MeRIP-seq
9
Hi-C
6
RRBS
3
FAIRE-seq
3
pCHi-C
3
small RNA-seq
3
snDrop-seq
2
Capture-C
2
RNA microarray
2
STARR-seq
1
CRISPR genome editing followed by sgRNA sequencing
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
tissue
Organ
2
pancreas
1
brain
1
kidney
Life stage
2
adult
1
unknown
Available data
3
bam
3
bed narrowPeak
3
bigBed narrowPeak
3
bigWig
2
fastq
Platform
2
Illumina Genome Analyzer I
Run type
2
single-ended
Read length (nt)
1
35
1
50
Library made from
3
DNA
Date released
1
August, 2017
1
July, 2019
1
November, 2018
Lab
3
AMP-T2D consortium
Replication type
2
anisogenic
1
unreplicated
month_released!
October, 2019
Showing 3 of 3 results
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Experiment
DSR821PLA
released
FAIRE-seq
of kidney
Homo sapiens
kidney female adult (30 years) and male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR803CTG
released
FAIRE-seq
of pancreas
Homo sapiens
pancreas adult (54 years) and adult (60 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR121227
released
FAIRE-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male (53 years)
Lab:
AMP-T2D consortium
Project:
AMP