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Assay category
2
Transcription
Assay
187
ChIP-seq
136
total RNA-seq
42
ATAC-seq
5
pCHi-C
4
GRO-seq
4
Hi-C
2
Capture-C
2
single cell RNA-seq
1
DNase-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
4
hg18
Organism
6
Homo sapiens
Biosample type
187
primary cell
180
tissue
6
in vitro differentiated cells
1
stem cell
Organ
1
embryo
Life stage
6
unknown
Available data
4
bigWig
4
fastq
2
tsv
Platform
4
Illumina HiSeq 2500
Run type
4
single-ended
Read length (nt)
4
50
Library made from
4
DNA
2
RNA
Date released
4
January, 2018
2
December, 2019
Lab
6
AMP-T2D consortium
Replication type
4
unreplicated
2
isogenic
Audit category:
2
audit script error
2
inconsistent ontology term
target.investigated_as!
RNA binding protein
Showing 6 of 6 results
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Experiment
DSR690SBQ
released
Audit error
2
single cell RNA-seq
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR054HMA
released
Audit error
2
single cell RNA-seq
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR520547
released
GRO-seq
of Posterior foregut
Homo sapiens
Posterior foregut
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR171680
released
GRO-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR641241
released
GRO-seq
of primitive gut cell
Homo sapiens
primitive gut cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR626869
released
GRO-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Lab:
AMP-T2D consortium
Project:
AMP