Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Assay category
8
3D chromatin structure
Assay
107
ChIP-seq
86
total RNA-seq
83
single cell RNA-seq
46
ATAC-seq
16
DNase-seq
10
RRBS
8
Hi-C
2
small RNA-seq
1
FAIRE-seq
1
pCHi-C
Project
5
AMP
3
HPAP
RFA
5
AMP
3
HPAP
Experiment status
8
released
Genome assembly (visualization)
8
hg19
1
GRCh38
Organism
8
Homo sapiens
Biosample type
8
primary cell
4
in vitro differentiated cells
3
tissue
1
cell line
Organ
6
epithelium
3
blood vessel
3
brain
3
pancreas
3
vasculature
1
connective tissue
1
liver
1
vein
Life stage
5
unknown
3
adult
Available data
4
bed bed3+
4
bedpe bed3+
4
bigWig
4
hdf5
4
hic
3
cool
Library made from
8
DNA
Date released
4
July, 2019
3
October, 2022
1
March, 2020
Lab
5
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Replication type
4
anisogenic
4
isogenic
unreplicated
Audit category:
3
audit script error
assay_title!
Capture-C
replication_type!
unreplicated
Showing 8 of 8 results
table-tab-icon
matrix-icon
Download
Experiment
DSR177NQH
released
Audit error
1
Hi-C
of pancreatic acinar cell
Homo sapiens
pancreatic acinar cell female adult (40 years) and female adult (58 years) and male adult (19 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR954WVM
released
Audit error
1
Hi-C
of pancreatic beta cell
Homo sapiens
pancreatic beta cell female adult (27 years) and female adult (58 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR767WCG
released
Audit error
1
Hi-C
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell female adult (27 years) and female adult (58 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR430XOJ
released
Hi-C
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR770TGA
released
Hi-C
of brain pericyte
Homo sapiens
brain pericyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR270TQF
released
Hi-C
of astrocyte of the cerebellum
Homo sapiens
astrocyte of the cerebellum
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR933OWU
released
Hi-C
of endothelial cell of hepatic sinusoid
Homo sapiens
endothelial cell of hepatic sinusoid
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR240JNB
released
Hi-C
of brain microvascular endothelial cell
Homo sapiens
brain microvascular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP