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Citing CMDGA
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Assay category
4
3D chromatin structure
Assay
535
total RNA-seq
235
ChIP-seq
71
ATAC-seq
DNase-seq
10
single cell RNA-seq
8
WGBS
6
pCHi-C
4
Hi-C
3
small RNA-seq
2
Capture-C
1
RNA microarray
1
RRBS
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
4
hg19
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
tissue
Organ
9
pancreas
8
epithelium
6
musculature of body
5
blood vessel
5
vasculature
4
limb
4
liver
3
brain
3
heart
vein
1
connective tissue
1
kidney
Life stage
3
unknown
1
adult
Available data
3
bed bed3+
3
bigWig
3
hdf5
1
bedpe bed3+
1
hic
Library made from
4
DNA
Date released
3
July, 2019
1
March, 2020
Lab
4
AMP-T2D consortium
Replication type
3
isogenic
1
unreplicated
assay_title!
DNase-seq
organ_slims!
vein
Showing 4 of 4 results
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Experiment
DSR073ZJB
released
Hi-C
of aorta
Homo sapiens
aorta female adult (30 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR770TGA
released
Hi-C
of brain pericyte
Homo sapiens
brain pericyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR933OWU
released
Hi-C
of endothelial cell of hepatic sinusoid
Homo sapiens
endothelial cell of hepatic sinusoid
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR240JNB
released
Hi-C
of brain microvascular endothelial cell
Homo sapiens
brain microvascular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP