Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Assay category
2
3D chromatin structure
Assay
124
ChIP-seq
107
total RNA-seq
29
ATAC-seq
6
MeRIP-seq
6
pCHi-C
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
Hi-C
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
DNase-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
2
AMP
RFA
1
AMP
1
AMP2
Experiment status
2
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
15
tissue
10
primary cell
4
in vitro differentiated cells
2
cell line
Organ
1
epithelium
1
liver
1
pancreas
Life stage
child
1
embryonic
1
unknown
Available data
2
bedpe bed3+
2
hic
Library made from
2
DNA
Date released
1
August, 2021
1
November, 2019
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
Replication type
2
unreplicated
Audit category:
1
inconsistent ontology term
Audit category:
inconsistent assembly
assay_title!
STARR-seq
audit.WARNING.category!
inconsistent assembly
replicates.library.biosample.life_stage!
child
Showing 2 of 2 results
table-tab-icon
matrix-icon
Download
Experiment
DSR744JJN
released
Hi-C
of HepG2
Homo sapiens
HepG2
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR433ZII
released
Audit error
1
Hi-C
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
AMP-T2D consortium
Project:
AMP