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Citing CMDGA
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Assay category
1
3D chromatin structure
Assay
33
total RNA-seq
19
ATAC-seq
15
ChIP-seq
6
MeRIP-seq
2
Capture-C
1
Hi-C
Project
7
AMP
RFA
7
AMP
Experiment status
7
released
Genome assembly (visualization)
1
hg19
Organism
7
Homo sapiens
Target of assay
3
control
3
nucleotide modification
Biosample type
7
cell line
Organ
7
epithelium
7
pancreas
Life stage
6
unknown
1
embryonic
Available data
1
bedpe bed3+
1
hic
Library made from
6
RNA
1
DNA
Date released
6
November, 2020
1
November, 2019
Lab
6
Rohit N. Kulkarni, M.D., Ph.D.
1
AMP-T2D consortium
Replication type
6
isogenic
1
unreplicated
Audit category:
7
inconsistent ontology term
audit.WARNING.category!
inconsistent control run_type
month_released!
February, 2023
Showing 7 of 7 results
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Experiment
DSR399KWJ
released
Audit error
1
MeRIP-seq
of EndoC_BH1
Homo sapiens
EndoC_BH1
Target:
N6-Methyladenosine_m6A
Lab:
Rohit N. Kulkarni, M.D., Ph.D.
Project:
AMP
Experiment
DSR885XWK
released
Audit error
1
MeRIP-seq
of EndoC_BH1
Homo sapiens
EndoC_BH1
Target:
Control
Lab:
Rohit N. Kulkarni, M.D., Ph.D.
Project:
AMP
Experiment
DSR814PSX
released
Audit error
1
MeRIP-seq
of EndoC_BH1
Homo sapiens
EndoC_BH1
Target:
N6-Methyladenosine_m6A
Lab:
Rohit N. Kulkarni, M.D., Ph.D.
Project:
AMP
Experiment
DSR251XSB
released
Audit error
1
MeRIP-seq
of EndoC_BH1
Homo sapiens
EndoC_BH1
Target:
Control
Lab:
Rohit N. Kulkarni, M.D., Ph.D.
Project:
AMP
Experiment
DSR781LLU
released
Audit error
1
MeRIP-seq
of EndoC_BH1
Homo sapiens
EndoC_BH1
Target:
N6-Methyladenosine_m6A
Lab:
Rohit N. Kulkarni, M.D., Ph.D.
Project:
AMP
Experiment
DSR282KWU
released
Audit error
1
MeRIP-seq
of EndoC_BH1
Homo sapiens
EndoC_BH1
Target:
Control
Lab:
Rohit N. Kulkarni, M.D., Ph.D.
Project:
AMP
Experiment
DSR433ZII
released
Audit error
1
Hi-C
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
AMP-T2D consortium
Project:
AMP