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Schema
Citing CMDGA
Clear Filters
Assay category
4
DNA methylation
1
3D chromatin structure
Assay
747
ChIP-seq
237
total RNA-seq
134
single cell RNA-seq
61
ATAC-seq
27
snATAC-seq
WGBS
12
DNase-seq
5
GRO-seq
4
RRBS
2
FAIRE-seq
1
Hi-C
1
pCHi-C
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
4
hg19
Organism
5
Homo sapiens
Biosample type
3
tissue
1
cell line
1
primary cell
Organ
2
liver
2
musculature of body
Life stage
3
adult
1
child
1
unknown
Available data
23
hic
20
bedpe bed3+
19
bed bedMethyl
19
bigBed bedMethyl
5
bed bed3+
5
bigWig
5
fastq
5
hdf5
3
cool
1
bedpe
Platform
4
Illumina Genome Analyzer IIx
1
Illumina HiSeq 2000
Run type
4
single-ended
1
paired-ended
Read length (nt)
4
36
1
50
Library made from
5
DNA
Date released
4
August, 2017
1
December, 2018
Lab
5
AMP-T2D consortium
Replication type
5
isogenic
assay_title!
WGBS
target.investigated_as!
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Showing 5 of 5 results
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Experiment
TSTSR542TGF
released
Hi-C
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR335337
released
RRBS
of liver
Homo sapiens
liver female adult (83 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR745497
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue male adult (71 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR621123
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue female adult (83 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR288454
released
RRBS
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast
Lab:
AMP-T2D consortium
Project:
AMP