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Schema
Citing CMDGA
Clear Filters
Assay category
5
DNA methylation
2
3D chromatin structure
Assay
534
total RNA-seq
205
ChIP-seq
101
ATAC-seq
90
DNase-seq
68
single cell RNA-seq
7
pCHi-C
6
WGBS
6
snATAC-seq
5
RRBS
4
small RNA-seq
3
RNA microarray
3
snDrop-seq
2
Capture-C
2
Hi-C
2
STARR-seq
1
FAIRE-seq
Project
7
AMP
RFA
6
AMP
1
AMP2
Experiment status
7
released
Genome assembly (visualization)
7
hg19
Organism
7
Homo sapiens
Biosample type
5
primary cell
2
tissue
Organ
14
epithelium
11
musculature of body
11
pancreas
6
liver
6
vasculature
5
blood vessel
5
brain
5
heart
5
kidney
4
limb
2
connective tissue
2
vein
1
eye
1
pericardium
0
skin of body
Life stage
5
unknown
2
adult
Available data
5
bed bedMethyl
5
bigBed bedMethyl
1
bed bed3+
1
bigWig
1
hdf5
1
hic
Library made from
7
DNA
Date released
6
July, 2019
1
August, 2021
Lab
6
AMP-T2D consortium
1
Katalin Susztak, Upenn
Replication type
6
isogenic
1
unreplicated
Audit category:
2
inconsistent ontology term
Showing 7 of 7 results
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Experiment
DSR145PQU
released
Hi-C
of kidney
Homo sapiens
kidney female adult (63 years)
Lab:
Katalin Susztak, Upenn
Project:
AMP
Experiment
DSR770TGA
released
Hi-C
of brain pericyte
Homo sapiens
brain pericyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR253RYM
released
Audit error
1
RRBS
of cardiac fibroblast
Homo sapiens
cardiac fibroblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR691GRN
released
RRBS
of renal cortical epithelial cell
Homo sapiens
renal cortical epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR567VXL
released
RRBS
of kidney epithelial cell
Homo sapiens
kidney epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR682FAB
released
Audit error
1
RRBS
of epithelial cell of proximal tubule
Homo sapiens
epithelial cell of proximal tubule
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR841GWU
released
RRBS
of kidney
Homo sapiens
kidney female adult (83 years)
Lab:
AMP-T2D consortium
Project:
AMP