Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Assay category
5
3D chromatin structure
1
DNA methylation
Assay
102
ChIP-seq
61
total RNA-seq
46
ATAC-seq
11
DNase-seq
6
single cell RNA-seq
5
Hi-C
2
WGBS
1
FAIRE-seq
1
RRBS
1
pCHi-C
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
5
primary cell
1
tissue
Organ
14
epithelium
11
musculature of body
11
pancreas
6
liver
6
vasculature
5
blood vessel
5
brain
5
heart
5
kidney
4
limb
2
connective tissue
2
vein
1
eye
pericardium
Life stage
5
unknown
1
adult
Available data
3
hic
2
bed bed3+
2
bedpe bed3+
2
bigWig
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
Library made from
6
DNA
Date released
3
July, 2019
2
March, 2020
1
October, 2019
Lab
6
AMP-T2D consortium
Replication type
3
isogenic
2
unreplicated
1
anisogenic
Audit category:
1
audit script error
organ_slims!
bone marrow
pericardium
Showing 6 of 6 results
table-tab-icon
matrix-icon
Download
Experiment
DSR073ZJB
released
Hi-C
of aorta
Homo sapiens
aorta female adult (30 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR430XOJ
released
Hi-C
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR251SCT
released
Audit error
1
Hi-C
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR933OWU
released
Hi-C
of endothelial cell of hepatic sinusoid
Homo sapiens
endothelial cell of hepatic sinusoid
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR240JNB
released
Hi-C
of brain microvascular endothelial cell
Homo sapiens
brain microvascular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR438ASZ
released
RRBS
of choroid plexus epithelial cell
Homo sapiens
choroid plexus epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP