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Schema
Citing CMDGA
Clear Filters
Assay category
5
DNA methylation
1
3D chromatin structure
Assay
163
ChIP-seq
130
total RNA-seq
50
ATAC-seq
18
single cell RNA-seq
10
DNase-seq
5
WGBS
1
Hi-C
1
pCHi-C
Project
47
HPAP
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
5
GRCh38
Organism
6
Homo sapiens
Biosample type
4
tissue
2
cell line
Organ
2
liver
2
pancreas
2
spleen
Life stage
4
adult
2
child
Available data
6
fastq
5
bam
5
bed bedMethyl
5
bigBed bedMethyl
5
bigWig
Platform
5
Illumina HiSeq X Ten
1
Illumina HiSeq 2000
Run type
6
paired-ended
6
single-ended
Read length (nt)
5
151
1
50
Library made from
6
DNA
Date released
5
November, 2018
1
December, 2018
Lab
6
AMP-T2D consortium
Replication type
4
unreplicated
2
isogenic
month_released!
October, 2022
Showing 6 of 6 results
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Experiment
TSTSR542TGF
released
Hi-C
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR496DZA
released
WGBS
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR478JMV
released
WGBS
of spleen
Homo sapiens
spleen male adult (37 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR197AYP
released
WGBS
of spleen
Homo sapiens
spleen female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR950TQA
released
WGBS
of body of pancreas
Homo sapiens
body of pancreas male adult (37 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR820HBA
released
WGBS
of body of pancreas
Homo sapiens
body of pancreas male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP