Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Assay category
5
3D chromatin structure
Assay
465
ChIP-seq
263
single cell RNA-seq
248
total RNA-seq
148
ATAC-seq
87
RNA microarray
83
snATAC-seq
58
WGBS
53
pCHi-C
10
MeRIP-seq
5
GRO-seq
5
Hi-C
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
DNase-seq
3
snDrop-seq
2
Capture-C
2
HiChIP
2
RRBS
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
5
AMP
RFA
4
AMP
1
AMP2
Experiment status
5
released
Genome assembly (visualization)
hg19
GRCh38
Organism
5
Homo sapiens
Biosample type
5
tissue
Organ
4
limb
4
musculature of body
1
pancreas
Life stage
5
adult
Available data
1
bedpe bed3+
Library made from
5
DNA
Date released
4
July, 2019
1
August, 2021
December, 2018
Lab
4
AMP-T2D consortium
1
Bing Ren, UCSD
Replication type
4
unreplicated
1
anisogenic
assembly!
GRCh38
hg19
audit.WARNING.category!
inconsistent control run_type
month_released!
December, 2018
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
Experiment
DSR942HZR
released
Hi-C
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (56 years) and female adult (59 years) and male adult (53 years)
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR998CGE
released
Hi-C
of gastrocnemius medialis
Homo sapiens
gastrocnemius medialis male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR851SPB
released
Hi-C
of gastrocnemius medialis
Homo sapiens
gastrocnemius medialis female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR920BPY
released
Hi-C
of gastrocnemius medialis
Homo sapiens
gastrocnemius medialis female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR163ZFS
released
Hi-C
of gastrocnemius medialis
Homo sapiens
gastrocnemius medialis male adult (37 years)
Lab:
AMP-T2D consortium
Project:
AMP