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Citing CMDGA
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Assay category
3
3D chromatin structure
Assay
123
total RNA-seq
39
ChIP-seq
31
ATAC-seq
7
pCHi-C
6
MeRIP-seq
4
DNase-seq
3
Hi-C
2
Capture-C
2
RRBS
2
single cell RNA-seq
1
STARR-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
cell line
Organ
1
epithelium
1
pancreas
Life stage
adult
2
unknown
1
embryonic
Available data
3
bedpe bed3+
3
hic
Library made from
3
DNA
Date released
2
October, 2019
1
November, 2019
Lab
3
AMP-T2D consortium
Replication type
2
isogenic
1
unreplicated
Audit category:
3
inconsistent ontology term
1
audit script error
audit.WARNING.category!
inconsistent assembly
files.file_type!
tagAlign bed3+
replicates.library.biosample.life_stage!
adult
Showing 3 of 3 results
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Experiment
DSR464RKE
released
Audit error
1
Hi-C
of cardiac precursors (cardiac muscle cell)
Homo sapiens
cardiac precursors (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR235SPD
released
Audit error
1
Hi-C
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR433ZII
released
Audit error
1
Hi-C
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
AMP-T2D consortium
Project:
AMP