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Citing CMDGA
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Assay category
3
3D chromatin structure
Assay
187
ChIP-seq
154
total RNA-seq
128
ATAC-seq
117
single cell RNA-seq
56
snATAC-seq
17
pCHi-C
13
DNase-seq
4
RRBS
3
Hi-C
2
small RNA-seq
1
DNAme array
Project
2
AMP
1
ITG
RFA
2
AMP
1
ITG
Experiment status
3
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
3
Homo sapiens
Biosample type
16
tissue
4
in vitro differentiated cells
3
cell line
3
primary cell
Organ
epithelium
4
blood vessel
4
vasculature
3
brain
3
pancreas
2
vein
1
connective tissue
1
liver
Life stage
2
unknown
1
adult
Available data
2
bed bed3+
2
bigWig
2
hdf5
1
hic
Library made from
3
DNA
Date released
2
July, 2019
1
March, 2023
Lab
2
AMP-T2D consortium
1
ITG
Replication type
2
isogenic
1
anisogenic
lab.title!
Xin Sun, UCSD
organ_slims!
epithelium
Showing 3 of 3 results
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Experiment
DSR798SDK
released
Hi-C
of chondrocytes
Homo sapiens
chondrocytes female adult (58 years) and female adult (63 years) and female adult (65 years) and female adult (73 years) and female adult (75 years) and male adult (61 year) and male adult (72 years) and male adult (75 years)
Lab:
ITG
Project:
ITG
Experiment
DSR770TGA
released
Hi-C
of brain pericyte
Homo sapiens
brain pericyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR270TQF
released
Hi-C
of astrocyte of the cerebellum
Homo sapiens
astrocyte of the cerebellum
Lab:
AMP-T2D consortium
Project:
AMP