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Citing CMDGA
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Assay category
3
3D chromatin structure
Assay
459
total RNA-seq
172
ChIP-seq
52
ATAC-seq
11
DNase-seq
8
WGBS
6
single cell RNA-seq
3
Hi-C
3
small RNA-seq
2
pCHi-C
1
FAIRE-seq
1
RNA microarray
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Organ
4
limb
4
musculature of body
3
blood vessel
3
brain
3
epithelium
3
vasculature
2
liver
2
pancreas
1
connective tissue
1
kidney
1
vein
0
adipose tissue
Life stage
3
unknown
Available data
3
hic
2
bed bed3+
bedpe bed3+
2
bigWig
2
hdf5
Library made from
3
DNA
Date released
2
July, 2019
1
October, 2019
Lab
3
AMP-T2D consortium
Replication type
2
isogenic
1
unreplicated
Audit category:
1
audit script error
files.file_type!
bedpe bed3+
organ_slims!
urinary bladder
Showing 3 of 3 results
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Experiment
DSR251SCT
released
Audit error
1
Hi-C
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR933OWU
released
Hi-C
of endothelial cell of hepatic sinusoid
Homo sapiens
endothelial cell of hepatic sinusoid
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR240JNB
released
Hi-C
of brain microvascular endothelial cell
Homo sapiens
brain microvascular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP