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Schema
Citing CMDGA
Clear Filters
Assay category
5
3D chromatin structure
Assay
547
ChIP-seq
90
ATAC-seq
50
total RNA-seq
22
DNase-seq
21
pCHi-C
7
WGBS
7
snATAC-seq
6
MeRIP-seq
5
Hi-C
4
RRBS
4
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
single cell RNA-seq
1
FAIRE-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
5
hg19
1
GRCh38
Organism
5
Homo sapiens
Biosample type
4
in vitro differentiated cells
1
cell line
Organ
1
pancreas
Life stage
3
adult
2
unknown
Available data
4
bedpe bed3+
4
hic
1
bed bed3+
1
bigWig
1
hdf5
Library made from
5
DNA
Date released
July, 2019
3
October, 2019
2
March, 2020
December, 2018
Lab
5
AMP-T2D consortium
Replication type
11
unreplicated
9
anisogenic
5
isogenic
Audit category:
4
inconsistent ontology term
Audit category:
1
inconsistent assembly
month_released!
December, 2018
July, 2019
Showing 5 of 5 results
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Experiment
DSR763JZB
released
Audit error
1
Hi-C
of lymphocyte of B lineage (iPSC)
Homo sapiens
lymphocyte of B lineage (iPSC)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR722REK
released
Audit error
1
Hi-C
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR464RKE
released
Audit error
1
Hi-C
of cardiac precursors (cardiac muscle cell)
Homo sapiens
cardiac precursors (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR235SPD
released
Audit error
1
Hi-C
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR617LKP
released
Audit warning
1
Hi-C
of Panc1
Homo sapiens
Panc1
Lab:
AMP-T2D consortium
Project:
AMP