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Schema
Citing CMDGA
Clear Filters
Assay category
6
3D chromatin structure
Assay
535
total RNA-seq
312
ChIP-seq
72
ATAC-seq
18
DNase-seq
10
single cell RNA-seq
8
WGBS
8
snATAC-seq
6
Hi-C
6
pCHi-C
3
small RNA-seq
2
Capture-C
1
FAIRE-seq
1
RNA microarray
1
RRBS
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
5
primary cell
1
tissue
Organ
9
pancreas
8
epithelium
6
musculature of body
5
blood vessel
5
vasculature
4
limb
4
liver
3
brain
3
heart
2
vein
1
connective tissue
1
kidney
0
blood
Life stage
5
unknown
1
adult
Available data
3
bed bed3+
3
bigWig
3
hdf5
3
hic
2
bedpe bed3+
Library made from
6
DNA
Date released
3
July, 2019
2
March, 2020
1
October, 2019
Lab
6
AMP-T2D consortium
Replication type
3
isogenic
2
unreplicated
1
anisogenic
Audit category:
1
audit script error
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Showing 6 of 6 results
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Experiment
DSR073ZJB
released
Hi-C
of aorta
Homo sapiens
aorta female adult (30 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR430XOJ
released
Hi-C
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR251SCT
released
Audit error
1
Hi-C
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR770TGA
released
Hi-C
of brain pericyte
Homo sapiens
brain pericyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR933OWU
released
Hi-C
of endothelial cell of hepatic sinusoid
Homo sapiens
endothelial cell of hepatic sinusoid
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR240JNB
released
Hi-C
of brain microvascular endothelial cell
Homo sapiens
brain microvascular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP