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Assay
1871
ChIP-seq
531
ATAC-seq
212
DNase-seq
84
snATAC-seq
75
WGBS
68
total RNA-seq
57
pCHi-C
34
Hi-C
21
RRBS
5
FAIRE-seq
5
GRO-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
single cell RNA-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
RNA microarray
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
0
small RNA-seq
Project
2
T1D
1
AMP
RFA
2
T1D
1
AMP
Experiment status
3
released
Organism
2
Homo sapiens
Biosample type
2
cell line
1
tissue
Organ
1
adipose tissue
1
connective tissue
Life stage
2
unknown
Library made from
RNA
2
DNA
Date released
2
February, 2023
1
August, 2021
Lab
2
Kyle Gaulton, UCSD
1
AMP-T2D consortium
Replication type
3
unreplicated
assay_title!
CRISPRi RNA-seq
replicates.library.nucleic_acid_term_name!
RNA
Showing 3 of 3 results
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Experiment
DSR498QQL
released
HiChIP
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR895OVT
released
HiChIP
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR795DZU
released
RNA microarray
of subcutaneous adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP