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Citing CMDGA
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Assay
926
ChIP-seq
395
total RNA-seq
161
ATAC-seq
142
single cell RNA-seq
91
DNase-seq
47
pCHi-C
21
snATAC-seq
13
Hi-C
13
WGBS
9
small RNA-seq
8
RRBS
6
MeRIP-seq
5
GRO-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
STARR-seq
2
FAIRE-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
MPRA
1
RNA microarray
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
4
AMP
RFA
3
AMP2
1
AMP
Experiment status
4
released
Organism
3
Homo sapiens
Biosample type
3
cell line
1
tissue
Organ
kidney
2
liver
1
adipose tissue
1
connective tissue
1
epithelium
Life stage
adult
3
unknown
Library made from
3
RNA
Date released
4
August, 2021
Lab
3
Bing Ren, UCSD
1
AMP-T2D consortium
Replication type
2
isogenic
2
unreplicated
Audit category:
1
inconsistent ontology term
assay_title!
snDrop-seq
organ_slims!
kidney
replicates.library.biosample.life_stage!
adult
Showing 4 of 4 results
table-tab-icon
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Experiment
DSR433YZO
released
Audit error
1
STARR-seq
of Synthesized DNA
Homo sapiens
Synthesized DNA
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR661CGV
released
STARR-seq
of HepG2
Homo sapiens
HepG2
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR594DXF
released
STARR-seq
of HepG2
Homo sapiens
HepG2
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR795DZU
released
RNA microarray
of subcutaneous adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP