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Citing CMDGA
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Assay category
6
DNA methylation
Assay
1349
ChIP-seq
1191
total RNA-seq
329
ATAC-seq
182
single cell RNA-seq
178
DNase-seq
87
RNA microarray
38
pCHi-C
28
snATAC-seq
24
Hi-C
19
WGBS
16
small RNA-seq
10
MeRIP-seq
6
RRBS
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
FAIRE-seq
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
primary cell
6
tissue
Organ
2
pancreas
1
brain
1
heart
1
kidney
1
pericardium
Life stage
5
adult
1
unknown
Available data
6
bed bedMethyl
6
bigBed bedMethyl
Library made from
6
DNA
Date released
6
July, 2019
August, 2017
Lab
6
AMP-T2D consortium
Replication type
6
isogenic
assay_title!
GRO-seq
biosample_type!
primary cell
month_released!
August, 2017
organ_slims!
thymus
Showing 6 of 6 results
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Experiment
DSR210DNG
released
RRBS
of islet of Langerhans
Homo sapiens
islet of Langerhans male (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR222CVR
released
RRBS
of brain
Homo sapiens
brain male adult (66 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR841GWU
released
RRBS
of kidney
Homo sapiens
kidney female adult (83 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR478ZAU
released
RRBS
of heart left ventricle
Homo sapiens
heart left ventricle male adult (26 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR015YSF
released
RRBS
of pancreas
Homo sapiens
pancreas male adult (71 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR193QCQ
released
RRBS
of pericardium
Homo sapiens
pericardium female adult (70 years)
Lab:
AMP-T2D consortium
Project:
AMP