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Citing CMDGA
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Assay category
5
DNA methylation
2
Transcription
Assay
39
ChIP-seq
33
DNase-seq
6
Hi-C
total RNA-seq
5
RRBS
2
small RNA-seq
1
ATAC-seq
1
WGBS
1
pCHi-C
1
single cell RNA-seq
1
snATAC-seq
Project
7
AMP
RFA
7
AMP
Experiment status
7
released
Genome assembly (visualization)
5
hg19
2
GRCh38
Organism
7
Homo sapiens
Biosample type
5
tissue
2
primary cell
Organ
7
musculature of body
6
brain
6
epithelium
5
kidney
5
liver
4
connective tissue
4
pancreas
3
adipose tissue
3
heart
1
eye
1
pericardium
1
vasculature
Life stage
5
adult
1
embryonic
1
unknown
Available data
3
bed bedMethyl
3
bigBed bedMethyl
2
bam
2
bigWig
2
fastq
2
tsv
Platform
2
Illumina Genome Analyzer IIx
Run type
2
single-ended
Read length (nt)
2
36
Library made from
5
DNA
2
RNA
Date released
4
August, 2017
3
July, 2019
Lab
7
AMP-T2D consortium
Replication type
3
isogenic
2
anisogenic
2
unreplicated
assay_title!
total RNA-seq
month_released!
June, 2018
Showing 7 of 7 results
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Experiment
DSR488BRN
released
RRBS
of skeletal muscle cell
Homo sapiens
skeletal muscle cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR623PWW
released
small RNA-seq
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue female embryo (19 weeks) and male embryo (22 weeks)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR207MHZ
released
small RNA-seq
of skeletal muscle satellite cell
Homo sapiens
skeletal muscle satellite cell female adult (64 years) and male adult (21 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR698044
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue female adult (72 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR637767
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR745497
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue male adult (71 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR621123
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue female adult (83 years)
Lab:
AMP-T2D consortium
Project:
AMP