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Citing CMDGA
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Assay category
5
DNA methylation
Assay
39
ChIP-seq
33
DNase-seq
6
Hi-C
6
total RNA-seq
5
RRBS
2
small RNA-seq
1
ATAC-seq
1
WGBS
1
pCHi-C
1
single cell RNA-seq
1
snATAC-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
3
hg19
Organism
5
Homo sapiens
Biosample type
4
tissue
1
primary cell
Organ
6
epithelium
5
musculature of body
4
kidney
2
brain
2
heart
2
liver
2
pancreas
1
connective tissue
1
eye
1
pericardium
1
vasculature
Life stage
4
adult
1
unknown
Available data
3
bed bedMethyl
3
bigBed bedMethyl
2
fastq
Platform
2
Illumina Genome Analyzer IIx
Run type
2
single-ended
Read length (nt)
2
36
Library made from
5
DNA
Date released
4
August, 2017
1
July, 2019
Lab
5
AMP-T2D consortium
Replication type
3
isogenic
2
unreplicated
biosample_type!
cell line
lab.title!
Stephen Parker, UMich
month_released!
February, 2018
Showing 5 of 5 results
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Experiment
DSR488BRN
released
RRBS
of skeletal muscle cell
Homo sapiens
skeletal muscle cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR698044
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue female adult (72 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR637767
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR745497
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue male adult (71 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR621123
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue female adult (83 years)
Lab:
AMP-T2D consortium
Project:
AMP