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Assay category
21
DNA methylation
Assay
1777
ChIP-seq
1527
total RNA-seq
531
ATAC-seq
369
single cell RNA-seq
212
DNase-seq
87
RNA microarray
85
snATAC-seq
75
WGBS
57
pCHi-C
34
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
21
AMP
RFA
21
AMP
Experiment status
21
released
Genome assembly (visualization)
19
hg19
Organism
21
Homo sapiens
Biosample type
11
tissue
10
primary cell
Organ
6
epithelium
5
musculature of body
4
kidney
2
brain
2
heart
2
liver
2
pancreas
1
connective tissue
1
eye
1
pericardium
1
vasculature
Life stage
11
unknown
10
adult
Available data
19
bed bedMethyl
19
bigBed bedMethyl
4
fastq
Platform
4
Illumina Genome Analyzer IIx
Run type
4
single-ended
Read length (nt)
4
36
Library made from
21
DNA
Date released
15
July, 2019
6
August, 2017
Lab
21
AMP-T2D consortium
Replication type
19
isogenic
2
unreplicated
Audit category:
2
inconsistent ontology term
month_released!
December, 2017
Showing 1 of 21 results
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Experiment
DSR467ULV
released
RRBS
of hepatocyte
Homo sapiens
hepatocyte
Lab:
AMP-T2D consortium
Project:
AMP